3D structure

PDB id
3G71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Bruceantin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.85 Å

Loop

Sequence
UGUGCG*UUAAG
Length
11 nucleotides
Bulged bases
3G71|1|0|A|2890
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3G71_096 not in the Motif Atlas
Homologous match to IL_4V9F_099
Geometric discrepancy: 0.056
The information below is about IL_4V9F_099
Detailed Annotation
tHS double platform
Broad Annotation
No text annotation
Motif group
IL_48489.1
Basepair signature
cWW-tSH-L-tHH-L-cWW
Number of instances in this motif group
8

Unit IDs

3G71|1|0|U|2864
3G71|1|0|G|2865
3G71|1|0|U|2866
3G71|1|0|G|2867
3G71|1|0|C|2868
3G71|1|0|G|2869
*
3G71|1|0|U|2888
3G71|1|0|U|2889
3G71|1|0|A|2890
3G71|1|0|A|2891
3G71|1|0|G|2892

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L3P
Chain U
50S ribosomal protein L24e

Coloring options:


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