IL_3G78_007

3D structure

PDB id

3G78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insight into group II intron catalysis from revised crystal structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UAGGUA*UACAGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47444.2

Basepair signature

cWW-tSH-tWH-tHW-tHS-cWW-cWW

Number of instances in this motif group

9

Unit IDs

3G78|1|A|U|158
3G78|1|A|A|159
3G78|1|A|G|160
3G78|1|A|G|161
3G78|1|A|U|162
3G78|1|A|A|163
*
3G78|1|A|U|214
3G78|1|A|A|215
3G78|1|A|C|216
3G78|1|A|A|217
3G78|1|A|G|218
3G78|1|A|A|219

Current chains

Chain A

Group II intron

Nearby chains