IL_3G9C_005

3D structure

PDB id

3G9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the product Bacillus anthracis glmS ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAG*CG

Length

5 nucleotides

Bulged bases

3G9C|1|F|A|6

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

3G9C|1|F|C|5
3G9C|1|F|A|6
3G9C|1|F|G|7
*
3G9C|1|Q|C|52
3G9C|1|Q|G|53

Current chains

Chain F

RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')

Chain Q

GLMS RIBOZYME

Nearby chains

Chain G

RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')

Chain P

glmS glucosamine-6-phosphate activated ribozyme; glmS ribozyme

Chain R

glmS glucosamine-6-phosphate activated ribozyme; glmS ribozyme