IL_3HAY_002
3D structure
- PDB id
- 3HAY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a substrate-bound full H/ACA RNP from Pyrococcus furiosus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.99 Å
Loop
- Sequence
- CUUGAGUG*UAAUUAUG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3HAY_002 not in the Motif Atlas
- Geometric match to IL_3HAX_001
- Geometric discrepancy: 0.1482
- The information below is about IL_3HAX_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16194.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
3HAY|1|E|C|9
3HAY|1|E|U|10
3HAY|1|E|U|11
3HAY|1|E|G|12
3HAY|1|E|A|13
3HAY|1|E|G|14
3HAY|1|E|U|15
3HAY|1|E|G|16
*
3HAY|1|E|U|42
3HAY|1|E|A|43
3HAY|1|E|A|44
3HAY|1|E|U|45
3HAY|1|E|U|46
3HAY|1|E|A|47
3HAY|1|E|U|48
3HAY|1|E|G|49
Current chains
- Chain E
- H/ACA RNA
Nearby chains
- Chain A
- Probable tRNA pseudouridine synthase B
- Chain F
- 5'-R(*AP*UP*AP*AP*UP*UP*(FHU)P*GP*AP*CP*UP*CP*AP*A)-3'
Coloring options: