IL_3I55_062

3D structure

PDB id

3I55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

CGUACC*GAAGAAG

Length

13 nucleotides

Bulged bases

3I55|1|0|G|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3I55_062 not in the Motif Atlas

Homologous match to IL_4V9F_063

Geometric discrepancy: 0.0763

The information below is about IL_4V9F_063

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_20700.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

10

Unit IDs

3I55|1|0|C|1764
3I55|1|0|G|1765
3I55|1|0|U|1766
3I55|1|0|A|1767
3I55|1|0|C|1768
3I55|1|0|C|1769
*
3I55|1|0|G|1774
3I55|1|0|A|1775
3I55|1|0|A|1776
3I55|1|0|G|1777
3I55|1|0|A|1778
3I55|1|0|A|1779
3I55|1|0|G|1780

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain Z

50S ribosomal protein L37Ae