IL_3ID5_002
3D structure
- PDB id
- 3ID5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Sulfolobus solfataricus C/D RNP assembled with Nop5, fibrillarin, L7Ae and a split half C/D RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.01 Å
Loop
- Sequence
- CUGAG*CUGUGAUG
- Length
- 13 nucleotides
- Bulged bases
- 3ID5|1|H|U|27
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3ID5_002 not in the Motif Atlas
- Geometric match to IL_3NVI_002
- Geometric discrepancy: 0.1291
- The information below is about IL_3NVI_002
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_69229.3
- Basepair signature
- cWW-L-tSH-L-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
3ID5|1|H|C|11
3ID5|1|H|U|12
3ID5|1|H|G|13
3ID5|1|H|A|14
3ID5|1|H|G|15
*
3ID5|1|H|C|24
3ID5|1|H|U|25
3ID5|1|H|G|26
3ID5|1|H|U|27
3ID5|1|H|G|28
3ID5|1|H|A|29
3ID5|1|H|U|30
3ID5|1|H|G|31
Current chains
- Chain H
- half C/D RNA
Nearby chains
- Chain E
- Pre mRNA splicing protein
- Chain G
- 50S ribosomal protein L7Ae
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