IL_3IGI_003

3D structure

PDB id

3IGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

CAAG*UGAAGGAAG

Length

13 nucleotides

Bulged bases

3IGI|1|A|A|106, 3IGI|1|A|G|107

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89312.1

Basepair signature

cWW-tSH-L-cWS-cWW-L

Number of instances in this motif group

1

Unit IDs

3IGI|1|A|C|76
3IGI|1|A|A|77
3IGI|1|A|A|78
3IGI|1|A|G|79
*
3IGI|1|A|U|103
3IGI|1|A|G|104
3IGI|1|A|A|105
3IGI|1|A|A|106
3IGI|1|A|G|107
3IGI|1|A|G|108
3IGI|1|A|A|109
3IGI|1|A|A|110
3IGI|1|A|G|111

Current chains

Chain A

Group IIC intron

Nearby chains

Chain B

5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3'