IL_3IGI_008

3D structure

PDB id

3IGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

UG*CUUUCUGCCAAAG

Length

15 nucleotides

Bulged bases

3IGI|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Pseudoknot

Broad Annotation

No text annotation

Motif group

IL_53787.1

Basepair signature

cWW-L-cWW-L-L-R-L-R-L-R-L-R

Number of instances in this motif group

1

Unit IDs

3IGI|1|A|U|168
3IGI|1|A|G|169
*
3IGI|1|A|C|197
3IGI|1|A|U|198
3IGI|1|A|U|199
3IGI|1|A|U|200
3IGI|1|A|C|201
3IGI|1|A|U|202
3IGI|1|A|G|203
3IGI|1|A|C|204
3IGI|1|A|C|205
3IGI|1|A|A|206
3IGI|1|A|A|207
3IGI|1|A|A|208
3IGI|1|A|G|209

Current chains

Chain A

Group IIC intron

Nearby chains