IL_3IGI_009

3D structure

PDB id

3IGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

UGAG*CAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

3IGI|1|A|U|172
3IGI|1|A|G|173
3IGI|1|A|A|174
3IGI|1|A|G|175
*
3IGI|1|A|C|190
3IGI|1|A|A|191
3IGI|1|A|A|192
3IGI|1|A|A|193
3IGI|1|A|G|194

Current chains

Chain A

Group IIC intron

Nearby chains