IL_3IGI_013

3D structure

PDB id

3IGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

UA*UACG

Length

6 nucleotides

Bulged bases

3IGI|1|A|A|376, 3IGI|1|A|C|377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

3IGI|1|A|U|365
3IGI|1|A|A|366
*
3IGI|1|A|U|375
3IGI|1|A|A|376
3IGI|1|A|C|377
3IGI|1|A|G|378

Current chains

Chain A

Group IIC intron

Nearby chains

Chain B

5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3'