IL_3IGI_015

3D structure

PDB id

3IGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

UAGGUA*UACAGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82292.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

3IGI|1|A|U|158
3IGI|1|A|A|159
3IGI|1|A|G|160
3IGI|1|A|G|161
3IGI|1|A|U|162
3IGI|1|A|A|163
*
3IGI|1|A|U|214
3IGI|1|A|A|215
3IGI|1|A|C|216
3IGI|1|A|A|217
3IGI|1|A|G|218
3IGI|1|A|A|219

Current chains

Chain A

Group IIC intron

Nearby chains