IL_3J28_031

3D structure

PDB id

3J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

12.9 Å

Loop

Sequence

GUGCCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

3J28|1|N|A|532

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J28|1|N|G|515
3J28|1|N|U|516
3J28|1|N|G|517
3J28|1|N|C|518
3J28|1|N|C|519
3J28|1|N|A|520
3J28|1|N|G|521
*
3J28|1|N|C|528
3J28|1|N|G|529
3J28|1|N|G|530
3J28|1|N|U|531
3J28|1|N|A|532
3J28|1|N|A|533
3J28|1|N|U|534
3J28|1|N|A|535
3J28|1|N|C|536

Current chains

Chain N

16S rRNA

Nearby chains