IL_3J2D_010
3D structure
- PDB id
- 3J2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 18.7 Å
Loop
- Sequence
- UGG*CCA
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Self-complementary: UGG,CCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J2D_010 not in the Motif Atlas
- Geometric match to IL_1ZZ5_002
- Geometric discrepancy: 0.3326
- The information below is about IL_1ZZ5_002
- Detailed Annotation
- UU cWW
- Broad Annotation
- Isolated non-canonical cWW
- Motif group
- IL_70707.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 70
Unit IDs
3J2D|1|N|U|140
3J2D|1|N|G|141
3J2D|1|N|G|142
*
3J2D|1|N|C|221
3J2D|1|N|C|222
3J2D|1|N|A|223
Current chains
- Chain N
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: