IL_3J2D_034
3D structure
- PDB id
- 3J2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 18.7 Å
Loop
- Sequence
- UAA*UG
- Length
- 5 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J2D_034 not in the Motif Atlas
- Homologous match to IL_5J7L_028
- Geometric discrepancy: 0.4521
- The information below is about IL_5J7L_028
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_27635.4
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 38
Unit IDs
3J2D|1|N|U|594
3J2D|1|N|A|595
3J2D|1|N|A|596
*
3J2D|1|N|U|644
3J2D|1|N|G|645
Current chains
- Chain N
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: