IL_3J2E_053

3D structure

PDB id

3J2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

15.3 Å

Loop

Sequence

GUUU*GAAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2E_053 not in the Motif Atlas

Geometric match to IL_4V9F_036

Geometric discrepancy: 0.3071

The information below is about IL_4V9F_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02203.1

Basepair signature

cWW-cSW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

3J2E|1|N|G|1006
3J2E|1|N|U|1007
3J2E|1|N|U|1008
3J2E|1|N|U|1009
*
3J2E|1|N|G|1020
3J2E|1|N|A|1021
3J2E|1|N|A|1022
3J2E|1|N|U|1023

Current chains

Chain N

16S rRNA

Nearby chains