IL_3J2F_088

3D structure

PDB id

3J2F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

17.6 Å

Loop

Sequence

GUGC*GCC

Length

7 nucleotides

Bulged bases

3J2F|1|N|U|1049

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J2F_088 not in the Motif Atlas

Homologous match to IL_4LFB_043

Geometric discrepancy: 0.3093

The information below is about IL_4LFB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2F|1|N|G|1048
3J2F|1|N|U|1049
3J2F|1|N|G|1050
3J2F|1|N|C|1051
*
3J2F|1|N|G|1207
3J2F|1|N|C|1208
3J2F|1|N|C|1209

Current chains

Chain N

16S rRNA

Nearby chains