IL_3J45_009

3D structure

PDB id

3J45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a non-translocating SecY protein channel with the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GUGUAGGAUAGGU*ACCC

Length

17 nucleotides

Bulged bases

3J45|1|5|U|2111, 3J45|1|5|G|2116, 3J45|1|5|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J45|1|5|G|2110
3J45|1|5|U|2111
3J45|1|5|G|2112
3J45|1|5|U|2113
3J45|1|5|A|2114
3J45|1|5|G|2115
3J45|1|5|G|2116
3J45|1|5|A|2117
3J45|1|5|U|2118
3J45|1|5|A|2119
3J45|1|5|G|2120
3J45|1|5|G|2121
3J45|1|5|U|2122
*
3J45|1|5|A|2176
3J45|1|5|C|2177
3J45|1|5|C|2178
3J45|1|5|C|2179

Current chains

Chain 5

23S ribosomal RNA

Nearby chains