IL_3J46_007

3D structure

PDB id

3J46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SecY protein translocation channel in action

Experimental method

ELECTRON MICROSCOPY

Resolution

10.1 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J46_007 not in the Motif Atlas

Homologous match to IL_7RQB_084

Geometric discrepancy: 0.4329

The information below is about IL_7RQB_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J46|1|4|A|2108
3J46|1|4|U|2109
3J46|1|4|G|2110
*
3J46|1|4|C|2179
3J46|1|4|U|2180
3J46|1|4|U|2181

Current chains

Chain 4

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L1