IL_3J5L_078
3D structure
- PDB id
- 3J5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli 50S subunit with ErmBL nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.6 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 3J5L|1|A|A|1938, 3J5L|1|A|U|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J5L_078 not in the Motif Atlas
- Homologous match to IL_4WF9_077
- Geometric discrepancy: 0.1447
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42218.2
- Basepair signature
- cWW-L-R-cHW-cWW-L-L-L-R-L
- Number of instances in this motif group
- 5
Unit IDs
3J5L|1|A|C|1934
3J5L|1|A|G|1935
3J5L|1|A|A|1936
3J5L|1|A|A|1937
3J5L|1|A|A|1938
3J5L|1|A|U|1939
3J5L|1|A|U|1940
3J5L|1|A|C|1941
3J5L|1|A|C|1942
3J5L|1|A|U|1943
3J5L|1|A|U|1944
3J5L|1|A|G|1945
*
3J5L|1|A|C|1961
3J5L|1|A|C|1962
3J5L|1|A|U|1963
3J5L|1|A|G|1964
Current chains
- Chain A
- 23S ribsomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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