IL_3J5S_007
3D structure
- PDB id
- 3J5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.5 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J5S_007 not in the Motif Atlas
- Geometric match to IL_3GM7_006
- Geometric discrepancy: 0.183
- The information below is about IL_3GM7_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
3J5S|1|A|C|2103
3J5S|1|A|C|2104
3J5S|1|A|U|2105
*
3J5S|1|A|A|2184
3J5S|1|A|U|2185
3J5S|1|A|G|2186
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L1
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