IL_3J5S_009

3D structure

PDB id

3J5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics

Experimental method

ELECTRON MICROSCOPY

Resolution

7.5 Å

Loop

Sequence

GUGUAGGAUAGGU*ACCC

Length

17 nucleotides

Bulged bases

3J5S|1|A|U|2111, 3J5S|1|A|G|2112, 3J5S|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J5S|1|A|G|2110
3J5S|1|A|U|2111
3J5S|1|A|G|2112
3J5S|1|A|U|2113
3J5S|1|A|A|2114
3J5S|1|A|G|2115
3J5S|1|A|G|2116
3J5S|1|A|A|2117
3J5S|1|A|U|2118
3J5S|1|A|A|2119
3J5S|1|A|G|2120
3J5S|1|A|G|2121
3J5S|1|A|U|2122
*
3J5S|1|A|A|2176
3J5S|1|A|C|2177
3J5S|1|A|C|2178
3J5S|1|A|C|2179

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

Energy-dependent translational throttle A (EttA)

Chain F

50S ribosomal protein L1