IL_3J5S_010

3D structure

PDB id

3J5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics

Experimental method

ELECTRON MICROSCOPY

Resolution

7.5 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

3J5S|1|A|A|2163

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J5S|1|A|G|2124
3J5S|1|A|G|2125
3J5S|1|A|A|2126
3J5S|1|A|G|2127
*
3J5S|1|A|C|2161
3J5S|1|A|G|2162
3J5S|1|A|A|2163
3J5S|1|A|C|2164
3J5S|1|A|C|2165
3J5S|1|A|U|2166
3J5S|1|A|U|2167
3J5S|1|A|G|2168
3J5S|1|A|A|2169
3J5S|1|A|A|2170
3J5S|1|A|A|2171
3J5S|1|A|U|2172
3J5S|1|A|A|2173
3J5S|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

Energy-dependent translational throttle A (EttA)

Chain F

50S ribosomal protein L1