IL_3J6B_001
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_001 not in the Motif Atlas
- Geometric match to IL_2OE5_001
- Geometric discrepancy: 0.1763
- The information below is about IL_2OE5_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 79
Unit IDs
3J6B|1|A|U|22
3J6B|1|A|U|23
3J6B|1|A|G|24
*
3J6B|1|A|C|3275
3J6B|1|A|U|3276
3J6B|1|A|A|3277
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 4
- 54S ribosomal protein L51, mitochondrial
- Chain 5
- 54S ribosomal protein L3, mitochondrial
- Chain 9
- 54S ribosomal protein L15, mitochondrial
- Chain a
- 54S ribosomal protein L20, mitochondrial
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