IL_3J6B_036
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAU*AGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_036 not in the Motif Atlas
- Homologous match to IL_5J7L_292
- Geometric discrepancy: 0.0983
- The information below is about IL_5J7L_292
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
3J6B|1|A|C|1364
3J6B|1|A|U|1365
3J6B|1|A|A|1366
3J6B|1|A|A|1367
3J6B|1|A|U|1368
*
3J6B|1|A|A|1397
3J6B|1|A|G|1398
3J6B|1|A|A|1399
3J6B|1|A|U|1400
3J6B|1|A|G|1401
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 3
- 54S ribosomal protein L27, mitochondrial
- Chain B
- 54S ribosomal protein RML2, mitochondrial
- Chain Y
- 54S ribosomal protein L34, mitochondrial
Coloring options: