IL_3J6B_078
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAAU*AUAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_078 not in the Motif Atlas
- Geometric match to IL_7RQB_075
- Geometric discrepancy: 0.1781
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
3J6B|1|A|C|2902
3J6B|1|A|A|2903
3J6B|1|A|A|2904
3J6B|1|A|A|2905
3J6B|1|A|U|2906
*
3J6B|1|A|A|3112
3J6B|1|A|U|3113
3J6B|1|A|A|3114
3J6B|1|A|A|3115
3J6B|1|A|G|3116
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- 54S ribosomal protein L9, mitochondrial
- Chain H
- 54S ribosomal protein L23, mitochondrial
Coloring options: