IL_3J6B_093
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6B_093 not in the Motif Atlas
- Homologous match to IL_5J7L_386
- Geometric discrepancy: 0.0776
- The information below is about IL_5J7L_386
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
3J6B|1|A|G|1618
3J6B|1|A|G|1619
3J6B|1|A|A|1620
3J6B|1|A|A|1621
3J6B|1|A|C|1622
3J6B|1|A|U|1623
3J6B|1|A|C|1624
3J6B|1|A|G|1625
3J6B|1|A|G|1626
*
3J6B|1|A|C|1890
3J6B|1|A|U|1891
3J6B|1|A|G|1892
3J6B|1|A|U|1893
3J6B|1|A|C|1894
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- 54S ribosomal protein L9, mitochondrial
- Chain I
- 54S ribosomal protein L38, mitochondrial
Coloring options: