IL_3J6B_094

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAU*AUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J6B_094 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3329

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

3J6B|1|A|U|2005
3J6B|1|A|U|2006
3J6B|1|A|A|2007
3J6B|1|A|U|2008
*
3J6B|1|A|A|2079
3J6B|1|A|U|2080
3J6B|1|A|A|2081

Current chains

Chain A

21S ribosomal RNA

Nearby chains