Motif IL_32983.2 Version IL_32983.2 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 2-7 | 3-5 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_003 | 4LFB | 0.7872 | 2 | A | SSU rRNA | C | 47 | U | 49 | A | 50 | G | 52 | * | U | 359 | A | 360 | G | 361 | cWW | cWW | ||||
| 2 | IL_8B0X_003 | 8B0X | 0.7863 | 2 | A | SSU rRNA | C | 47 | U | 49 | A | 50 | C | 52 | * | G | 359 | G | 360 | G | 361 | cWW | ntSs | cWW | |||
| 3 | IL_4N0T_004 | 4N0T | 0.0000 | 0 | B | U6 snRNA | G | 78 | A | 79 | U | 80 | G | 81 | * | C | 66 | C | 67 | C | 68 | cWW | ncWW | cWW | cWW | ||
| 4 | IL_9M86_006 | 9M86 | 0.2718 | 0 | D | RNA (31-MER) | G | 66 | A | 67 | U | 68 | G | 69 | * | C | 54 | C | 55 | C | 56 | cWW | ncWWa | cWW | |||
| 5 | IL_8CRE_417 | 8CRE | 0.3514 | 0 | CM | SSU rRNA | G | 495 | G | 496 | U | 497 | C | 498 | * | G | 485 | G | 486 | C | 487 | cWW | ncWw | ncSW | cWW | ||
| 6 | IL_7KJT_002 | 7KJT | 0.3625 | 0 | A | tRNA | C | 39 | C | 40 | A | 41 | G | 42 | * | C | 28 | U | 29 | G | 30 | ncWW | cWW | ||||
| 7 | IL_4QIK_001 | 4QIK | 0.4164 | 0 | D+C | RNA (23-mer) | U | 11 | G | 12 | U | 13 | G | 14 | * | C | 10 | U | 11 | G | 12 | cWW | cWw | cWW | |||
| 8 | IL_8GLP_022 | 8GLP | 0.6089 | 2 | L5 | LSU rRNA | G | 443 | G | 444 | U | 445 | C | 446 | * | G | 1300 | C | 1301 | C | 1304 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUG*CCC | 2 |
| CCUAAG*UAG | 1 |
| CCUAAC*GGG | 1 |
| GGUC*GGC | 1 |
| CCAG*CUG | 1 |
| UGUG*CUG | 1 |
| GGUC*GCUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*C | 2 |
| CUAA*A | 1 |
| CUAA*G | 1 |
| GU*G | 1 |
| CA*U | 1 |
| GU*U | 1 |
| GU*CUA | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | Updated, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (8)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.15 | Avg 0.56 | Max 0.98
Coloring options: