IL_3J6Y_041
3D structure
- PDB id
- 3J6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
Loop
- Sequence
- ACGUUUGG*CCAUCGU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J6Y|1|1S|A|817
3J6Y|1|1S|C|818
3J6Y|1|1S|G|819
3J6Y|1|1S|U|820
3J6Y|1|1S|U|821
3J6Y|1|1S|U|822
3J6Y|1|1S|G|823
3J6Y|1|1S|G|824
*
3J6Y|1|1S|C|848
3J6Y|1|1S|C|849
3J6Y|1|1S|A|850
3J6Y|1|1S|U|851
3J6Y|1|1S|C|852
3J6Y|1|1S|G|853
3J6Y|1|1S|U|854
Current chains
- Chain 1S
- 18S ribosomal RNA
Nearby chains
- Chain 59
- 60S ribosomal protein L19
- Chain S7
- 40S ribosomal protein S7
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