IL_3J6Y_191
3D structure
- PDB id
- 3J6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
Loop
- Sequence
- GGCUUGUG*UUUUUGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 3J6Y|1|2S|U|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J6Y|1|2S|G|2823
3J6Y|1|2S|G|2824
3J6Y|1|2S|C|2825
3J6Y|1|2S|U|2826
3J6Y|1|2S|U|2827
3J6Y|1|2S|G|2828
3J6Y|1|2S|U|2829
3J6Y|1|2S|G|2830
*
3J6Y|1|2S|U|2858
3J6Y|1|2S|U|2859
3J6Y|1|2S|U|2860
3J6Y|1|2S|U|2861
3J6Y|1|2S|U|2862
3J6Y|1|2S|G|2863
3J6Y|1|2S|A|2864
3J6Y|1|2S|U|2865
3J6Y|1|2S|U|2866
3J6Y|1|2S|C|2867
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 50
- 60S ribosomal protein L10
- Chain 69
- 60S ribosomal protein L29
- Chain L3
- 60S ribosomal protein L3
Coloring options: