IL_3J73_047
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AAG*CUUU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J73_047 not in the Motif Atlas
- Geometric match to IL_9E9Q_003
- Geometric discrepancy: 0.3968
- The information below is about IL_9E9Q_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36931.4
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 25
Unit IDs
3J73|1|5|A|1737
3J73|1|5|A|1738
3J73|1|5|G|1739
*
3J73|1|5|C|1789
3J73|1|5|U|1790
3J73|1|5|U|1791
3J73|1|5|U|1792
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- Ribosomal protein uL18
- Chain I
- Ribosomal protein uL16
- Chain T
- Ribosomal protein eL21
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