IL_3J73_060

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUUGAAGC*GUGGAG

Length

15 nucleotides

Bulged bases

3J73|1|5|U|2305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|C|2302
3J73|1|5|C|2303
3J73|1|5|U|2304
3J73|1|5|U|2305
3J73|1|5|G|2306
3J73|1|5|A|2307
3J73|1|5|A|2308
3J73|1|5|G|2309
3J73|1|5|C|2310
*
3J73|1|5|G|2328
3J73|1|5|U|2329
3J73|1|5|G|2330
3J73|1|5|G|2331
3J73|1|5|A|2332
3J73|1|5|G|2333

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA

Chain C

Ribosomal protein uL4

Chain e

Ribosomal protein eL32