IL_3J73_091

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGGAGG*CCGCCGGUGAAAUACC

Length

22 nucleotides

Bulged bases

3J73|1|5|A|3972, 3J73|1|5|U|4049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|G|3969
3J73|1|5|G|3970
3J73|1|5|G|3971
3J73|1|5|A|3972
3J73|1|5|G|3973
3J73|1|5|G|3974
*
3J73|1|5|C|4037
3J73|1|5|C|4038
3J73|1|5|G|4039
3J73|1|5|C|4040
3J73|1|5|C|4041
3J73|1|5|G|4042
3J73|1|5|G|4043
3J73|1|5|U|4044
3J73|1|5|G|4045
3J73|1|5|A|4046
3J73|1|5|A|4047
3J73|1|5|A|4048
3J73|1|5|U|4049
3J73|1|5|A|4050
3J73|1|5|C|4051
3J73|1|5|C|4052

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S6

Transfer RNA; tRNA

Chain SZ

Ribosomal protein es25

Chain z

Ribosomal protein uL1