IL_3J73_122
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUGG*CCGC
- Length
- 9 nucleotides
- Bulged bases
- 3J73|1|7|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J73_122 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3369
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
3J73|1|7|G|82
3J73|1|7|A|83
3J73|1|7|U|84
3J73|1|7|G|85
3J73|1|7|G|86
*
3J73|1|7|C|91
3J73|1|7|C|92
3J73|1|7|G|93
3J73|1|7|C|94
Current chains
- Chain 7
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Ribosomal protein uL30
- Chain I
- Ribosomal protein uL16
- Chain S
- Ribosomal protein eL20
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