IL_3J73_144

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AAUACAGGAC*GGCCCUGUAAUU

Length

22 nucleotides

Bulged bases

3J73|1|S2|C|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|A|528
3J73|1|S2|A|529
3J73|1|S2|U|530
3J73|1|S2|A|531
3J73|1|S2|C|532
3J73|1|S2|A|533
3J73|1|S2|G|534
3J73|1|S2|G|535
3J73|1|S2|A|536
3J73|1|S2|C|537
*
3J73|1|S2|G|546
3J73|1|S2|G|547
3J73|1|S2|C|548
3J73|1|S2|C|549
3J73|1|S2|C|550
3J73|1|S2|U|551
3J73|1|S2|G|552
3J73|1|S2|U|553
3J73|1|S2|A|554
3J73|1|S2|A|555
3J73|1|S2|U|556
3J73|1|S2|U|557

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

Ribosomal protein uS4

Chain Se

Ribosomal protein eS30