IL_3J73_145
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGGGCAAGUCUGGUGCCAG*CGGUAAUUCCAGCUC
- Length
- 35 nucleotides
- Bulged bases
- 3J73|1|S2|U|627, 3J73|1|S2|A|628
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J73|1|S2|G|598
3J73|1|S2|A|599
3J73|1|S2|G|600
3J73|1|S2|G|601
3J73|1|S2|G|602
3J73|1|S2|C|603
3J73|1|S2|A|604
3J73|1|S2|A|605
3J73|1|S2|G|606
3J73|1|S2|U|607
3J73|1|S2|C|608
3J73|1|S2|U|609
3J73|1|S2|G|610
3J73|1|S2|G|611
3J73|1|S2|U|612
3J73|1|S2|G|613
3J73|1|S2|C|614
3J73|1|S2|C|615
3J73|1|S2|A|616
3J73|1|S2|G|617
*
3J73|1|S2|C|624
3J73|1|S2|G|625
3J73|1|S2|G|626
3J73|1|S2|U|627
3J73|1|S2|A|628
3J73|1|S2|A|629
3J73|1|S2|U|630
3J73|1|S2|U|631
3J73|1|S2|C|632
3J73|1|S2|C|633
3J73|1|S2|A|634
3J73|1|S2|G|635
3J73|1|S2|C|636
3J73|1|S2|U|637
3J73|1|S2|C|638
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S4
- Messenger RNA
- Chain S5
- A/P tRNA
- Chain SC
- Ribosomal protein uS5
- Chain SD
- Ribosomal protein uS3
- Chain SJ
- Ribosomal protein uS4
- Chain SX
- Ribosomal protein uS12
- Chain Se
- Ribosomal protein eS30
Coloring options: