IL_3J73_154

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGACGGCC*GAAUGUUUU

Length

17 nucleotides

Bulged bases

3J73|1|S2|U|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|G|924
3J73|1|S2|G|925
3J73|1|S2|A|926
3J73|1|S2|C|927
3J73|1|S2|G|928
3J73|1|S2|G|929
3J73|1|S2|C|930
3J73|1|S2|C|931
*
3J73|1|S2|G|1010
3J73|1|S2|A|1011
3J73|1|S2|A|1012
3J73|1|S2|U|1013
3J73|1|S2|G|1014
3J73|1|S2|U|1015
3J73|1|S2|U|1016
3J73|1|S2|U|1017
3J73|1|S2|U|1018

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SB

Ribosomal protein eS1

Chain SN

Ribosomal protein uS15

Chain Sb

Ribosomal protein eS27