3D structure

PDB id
3J73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the translating mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GCCGCUAG*CUUGGACCGGC
Length
19 nucleotides
Bulged bases
3J73|1|S2|G|970
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J73|1|S2|G|949
3J73|1|S2|C|950
3J73|1|S2|C|951
3J73|1|S2|G|952
3J73|1|S2|C|953
3J73|1|S2|U|954
3J73|1|S2|A|955
3J73|1|S2|G|956
*
3J73|1|S2|C|967
3J73|1|S2|U|968
3J73|1|S2|U|969
3J73|1|S2|G|970
3J73|1|S2|G|971
3J73|1|S2|A|972
3J73|1|S2|C|973
3J73|1|S2|C|974
3J73|1|S2|G|975
3J73|1|S2|G|976
3J73|1|S2|C|977

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain 5
28S ribosomal RNA
Chain A
Ribosomal protein uL12
Chain SB
Ribosomal protein eS1
Chain SO
Ribosomal protein uS11

Coloring options:

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