IL_3J73_160

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGAAGACG*CGUCGUAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|C|1047
3J73|1|S2|G|1048
3J73|1|S2|A|1049
3J73|1|S2|A|1050
3J73|1|S2|G|1051
3J73|1|S2|A|1052
3J73|1|S2|C|1053
3J73|1|S2|G|1054
*
3J73|1|S2|C|1064
3J73|1|S2|G|1065
3J73|1|S2|U|1066
3J73|1|S2|C|1067
3J73|1|S2|G|1068
3J73|1|S2|U|1069
3J73|1|S2|A|1070
3J73|1|S2|G|1071

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain 5

28S ribosomal RNA

Chain A

Ribosomal protein uL12

Chain SO

Ribosomal protein uS11

Chain Sa

Ribosomal protein eS26