IL_3J73_165
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUUAAUUUGACUCAACACGGGAAACCUCACC*GGGCUGC
- Length
- 39 nucleotides
- Bulged bases
- 3J73|1|S2|A|1253, 3J73|1|S2|G|1256, 3J73|1|S2|A|1258, 3J73|1|S2|U|1519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J73|1|S2|G|1236
3J73|1|S2|C|1237
3J73|1|S2|U|1238
3J73|1|S2|U|1239
3J73|1|S2|A|1240
3J73|1|S2|A|1241
3J73|1|S2|U|1242
3J73|1|S2|U|1243
3J73|1|S2|U|1244
3J73|1|S2|G|1245
3J73|1|S2|A|1246
3J73|1|S2|C|1247
3J73|1|S2|U|1248
3J73|1|S2|C|1249
3J73|1|S2|A|1250
3J73|1|S2|A|1251
3J73|1|S2|C|1252
3J73|1|S2|A|1253
3J73|1|S2|C|1254
3J73|1|S2|G|1255
3J73|1|S2|G|1256
3J73|1|S2|G|1257
3J73|1|S2|A|1258
3J73|1|S2|A|1259
3J73|1|S2|A|1260
3J73|1|S2|C|1261
3J73|1|S2|C|1262
3J73|1|S2|U|1263
3J73|1|S2|C|1264
3J73|1|S2|A|1265
3J73|1|S2|C|1266
3J73|1|S2|C|1267
*
3J73|1|S2|G|1515
3J73|1|S2|G|1516
3J73|1|S2|G|1517
3J73|1|S2|C|1518
3J73|1|S2|U|1519
3J73|1|S2|G|1520
3J73|1|S2|C|1521
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S5
- A/P tRNA
- Chain S6
- P/E tRNA
- Chain SP
- Ribosomal protein uS19
- Chain SQ
- Ribosomal protein uS9
- Chain SS
- Ribosomal protein uS13
- Chain SU
- Ribosomal protein uS10
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
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