IL_3J73_180

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGAUUGGA*UCUAGAG

Length

15 nucleotides

Bulged bases

3J73|1|S2|U|1721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|C|1717
3J73|1|S2|G|1718
3J73|1|S2|A|1719
3J73|1|S2|U|1720
3J73|1|S2|U|1721
3J73|1|S2|G|1722
3J73|1|S2|G|1723
3J73|1|S2|A|1724
*
3J73|1|S2|U|1810
3J73|1|S2|C|1811
3J73|1|S2|U|1812
3J73|1|S2|A|1813
3J73|1|S2|G|1814
3J73|1|S2|A|1815
3J73|1|S2|G|1816

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain 5

28S ribosomal RNA

Chain SX

Ribosomal protein uS12

Chain V

Ribosomal protein uL14

Chain n

Ribosomal protein eL41