IL_3J73_183

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCCUCGGAU*AGAAGACGG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|C|1738
3J73|1|S2|C|1739
3J73|1|S2|C|1740
3J73|1|S2|U|1741
3J73|1|S2|C|1742
3J73|1|S2|G|1743
3J73|1|S2|G|1744
3J73|1|S2|A|1745
3J73|1|S2|U|1746
*
3J73|1|S2|A|1788
3J73|1|S2|G|1789
3J73|1|S2|A|1790
3J73|1|S2|A|1791
3J73|1|S2|G|1792
3J73|1|S2|A|1793
3J73|1|S2|C|1794
3J73|1|S2|G|1795
3J73|1|S2|G|1796

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

Ribosomal protein eS6

Chain SI

Ribosomal protein eS8

Chain W

Ribosomal protein eL24