3D structure

PDB id
3J73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the translating mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGUCCGGCCGUGUCGG*CCCGACCGGCGACCGGC
Length
33 nucleotides
Bulged bases
3J73|1|5|G|666
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J73|1|5|G|482
3J73|1|5|G|483
3J73|1|5|U|484
3J73|1|5|C|485
3J73|1|5|C|486
3J73|1|5|G|487
3J73|1|5|G|488
3J73|1|5|C|489
3J73|1|5|C|490
3J73|1|5|G|491
3J73|1|5|U|492
3J73|1|5|G|493
3J73|1|5|U|494
3J73|1|5|C|495
3J73|1|5|G|496
3J73|1|5|G|497
*
3J73|1|5|C|656
3J73|1|5|C|657
3J73|1|5|C|658
3J73|1|5|G|659
3J73|1|5|A|660
3J73|1|5|C|661
3J73|1|5|C|662
3J73|1|5|G|663
3J73|1|5|G|664
3J73|1|5|C|665
3J73|1|5|G|666
3J73|1|5|A|667
3J73|1|5|C|668
3J73|1|5|C|669
3J73|1|5|G|670
3J73|1|5|G|671
3J73|1|5|C|672

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain C
Ribosomal protein uL4
Chain Q
Ribosomal protein eL18
Chain r
Ribosomal protein eL28

Coloring options:

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