IL_3J73_211

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AACAAUGUAGGUA*UACCUACUAU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|A|2832
3J73|1|5|A|2833
3J73|1|5|C|2834
3J73|1|5|A|2835
3J73|1|5|A|2836
3J73|1|5|U|2837
3J73|1|5|G|2838
3J73|1|5|U|2839
3J73|1|5|A|2840
3J73|1|5|G|2841
3J73|1|5|G|2842
3J73|1|5|U|2843
3J73|1|5|A|2844
*
3J73|1|5|U|3844
3J73|1|5|A|3845
3J73|1|5|C|3846
3J73|1|5|C|3847
3J73|1|5|U|3848
3J73|1|5|A|3849
3J73|1|5|C|3850
3J73|1|5|U|3851
3J73|1|5|A|3852
3J73|1|5|U|3853

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain P

Ribosomal protein uL22

Chain V

Ribosomal protein uL14

Chain d

Ribosomal protein eL31