IL_3J73_227

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAGUAUGGUU*AGCUGAAAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|G|1168
3J73|1|S2|G|1169
3J73|1|S2|A|1170
3J73|1|S2|G|1171
3J73|1|S2|U|1172
3J73|1|S2|A|1173
3J73|1|S2|U|1174
3J73|1|S2|G|1175
3J73|1|S2|G|1176
3J73|1|S2|U|1177
3J73|1|S2|U|1178
*
3J73|1|S2|A|1183
3J73|1|S2|G|1184
3J73|1|S2|C|1185
3J73|1|S2|U|1186
3J73|1|S2|G|1187
3J73|1|S2|A|1188
3J73|1|S2|A|1189
3J73|1|S2|A|1190
3J73|1|S2|C|1191

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SX

Ribosomal protein uS12

Chain n

Ribosomal protein eL41

Chain p

Ribosomal protein eL43