3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UUGUG*UUUUUG
Length
11 nucleotides
Bulged bases
3J74|1|5|U|4437
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|5|U|4403
3J74|1|5|U|4404
3J74|1|5|G|4405
3J74|1|5|U|4406
3J74|1|5|G|4407
*
3J74|1|5|U|4435
3J74|1|5|U|4436
3J74|1|5|U|4437
3J74|1|5|U|4438
3J74|1|5|U|4439
3J74|1|5|G|4440

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain B
Ribosomal protein uL3
Chain I
Ribosomal protein uL16

Coloring options:

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