3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAGGGCAAGUCUGGUGCCAG*CGGUAAUUCCAGCUC
Length
35 nucleotides
Bulged bases
3J74|1|S2|A|628
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|S2|G|598
3J74|1|S2|A|599
3J74|1|S2|G|600
3J74|1|S2|G|601
3J74|1|S2|G|602
3J74|1|S2|C|603
3J74|1|S2|A|604
3J74|1|S2|A|605
3J74|1|S2|G|606
3J74|1|S2|U|607
3J74|1|S2|C|608
3J74|1|S2|U|609
3J74|1|S2|G|610
3J74|1|S2|G|611
3J74|1|S2|U|612
3J74|1|S2|G|613
3J74|1|S2|C|614
3J74|1|S2|C|615
3J74|1|S2|A|616
3J74|1|S2|G|617
*
3J74|1|S2|C|624
3J74|1|S2|G|625
3J74|1|S2|G|626
3J74|1|S2|U|627
3J74|1|S2|A|628
3J74|1|S2|A|629
3J74|1|S2|U|630
3J74|1|S2|U|631
3J74|1|S2|C|632
3J74|1|S2|C|633
3J74|1|S2|A|634
3J74|1|S2|G|635
3J74|1|S2|C|636
3J74|1|S2|U|637
3J74|1|S2|C|638

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain 4
Eukaryotic elongation factor 2
Chain SC
Ribosomal protein uS5
Chain SD
Ribosomal protein uS3
Chain SJ
Ribosomal protein uS4
Chain SX
Ribosomal protein uS12
Chain Se
Ribosomal protein eS30

Coloring options:

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