3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGGACGGCC*GAAUGUUUUC
Length
19 nucleotides
Bulged bases
3J74|1|S2|U|1016
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|S2|G|923
3J74|1|S2|G|924
3J74|1|S2|G|925
3J74|1|S2|A|926
3J74|1|S2|C|927
3J74|1|S2|G|928
3J74|1|S2|G|929
3J74|1|S2|C|930
3J74|1|S2|C|931
*
3J74|1|S2|G|1010
3J74|1|S2|A|1011
3J74|1|S2|A|1012
3J74|1|S2|U|1013
3J74|1|S2|G|1014
3J74|1|S2|U|1015
3J74|1|S2|U|1016
3J74|1|S2|U|1017
3J74|1|S2|U|1018
3J74|1|S2|C|1019

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SB
Ribosomal protein eS1
Chain SN
Ribosomal protein uS15
Chain SW
Ribosomal protein uS8
Chain Sb
Ribosomal protein eS27

Coloring options:

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