IL_3J74_148
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUUC*GGACCAGAGCGAAAGCAUUU
- Length
- 24 nucleotides
- Bulged bases
- 3J74|1|S2|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J74_148 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.2521
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_37443.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
3J74|1|S2|A|938
3J74|1|S2|U|939
3J74|1|S2|U|940
3J74|1|S2|C|941
*
3J74|1|S2|G|985
3J74|1|S2|G|986
3J74|1|S2|A|987
3J74|1|S2|C|988
3J74|1|S2|C|989
3J74|1|S2|A|990
3J74|1|S2|G|991
3J74|1|S2|A|992
3J74|1|S2|G|993
3J74|1|S2|C|994
3J74|1|S2|G|995
3J74|1|S2|A|996
3J74|1|S2|A|997
3J74|1|S2|A|998
3J74|1|S2|G|999
3J74|1|S2|C|1000
3J74|1|S2|A|1001
3J74|1|S2|U|1002
3J74|1|S2|U|1003
3J74|1|S2|U|1004
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SB
- Ribosomal protein eS1
- Chain SN
- Ribosomal protein uS15
- Chain SO
- Ribosomal protein uS11
- Chain Sa
- Ribosomal protein eS26
- Chain p
- Ribosomal protein eL43
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