3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUCGCUA*UAAAAGUC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|S2|G|1706
3J74|1|S2|U|1707
3J74|1|S2|C|1708
3J74|1|S2|G|1709
3J74|1|S2|C|1710
3J74|1|S2|U|1711
3J74|1|S2|A|1712
*
3J74|1|S2|U|1821
3J74|1|S2|A|1822
3J74|1|S2|A|1823
3J74|1|S2|A|1824
3J74|1|S2|A|1825
3J74|1|S2|G|1826
3J74|1|S2|U|1827
3J74|1|S2|C|1828

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain 4
Eukaryotic elongation factor 2
Chain 5
Large subunit ribosomal RNA; LSU rRNA
Chain SX
Ribosomal protein uS12
Chain n
Ribosomal protein eL41

Coloring options:

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